Article

Microbiome-based environmental monitoring of a dairy processing facility highlights the challenges associated with low microbial-load samples

2020-09-11

Abstract excerpt

Food processing environments can harbor microorganisms responsible for food spoilage or foodborne disease. Efficient and accurate identification of microorganisms throughout the food chain can allow the identification of sources of contamination and the timely implementation of control measures. Currently, microbial monitoring of the food chain relies heavily on culture-based techniques. These assays are determine...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 14985aa7-cb18-58a1-bd40-e4e9bb284959
DOI: 10.1101/2020.09.11.292862

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Microbiome-based environmental monitoring of a dairy processing facility highlights the challenges associated with low microbial-load samplesDOI 10.1101/2020.09.11.292862Read

Exploring bacterial dynamics in food spoilage: A metagenomic perspectiveSemantic proximity Read

Single laboratory evaluation of the (Q20+) nanopore sequencing kit for bacterial outbreak investigationsSemantic proximity Read

Direct Metatranscriptome RNA-seq and Multiplex RT-PCR Amplicon Sequencing on Nanopore MinION – Promising Strategies for Multiplex Identification of Viable Pathogens in FoodSemantic proximity Read

Single Laboratory Evaluation of the Q20+ Nanopore Sequencing Kit for Bacterial Outbreak Investigations.Semantic proximity Read

MiFoDB, a workflow for microbial food metagenomic characterization, enables high-resolution analysis of fermented food microbial dynamicsSemantic proximity Read

The sources and transmission routes of microbial populations throughout a meat processing facilitySemantic proximity Read

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing TechnologiesSemantic proximity Read

The Influence of Technological Shifts in the Food Chain on the Emergence of Foodborne Pathogens: An OverviewSemantic proximity Read

Cell recovery and DNA extraction methods skew relative abundance estimations of foodborne pathogens and spoilage organisms on stainless steel surfacesSemantic proximity Read

Fermented food metagenomics reveals substrate-associated differences in taxonomy, health-associated- and antibiotic resistance-determinantsSemantic proximity Read

A Random Survey of Microbial Load in Dairy Products on Sale in Addis Ababa SupermarketsSemantic proximity Read

PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and trackingSemantic proximity Read