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PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking

2024-06-30

Abstract excerpt

<h4>Background</h4> Food contamination by pathogens poses a global health threat, affecting an estimated 600 million people annually. During a foodborne outbreak investigation, microbiological analysis of food vehicles detects responsible pathogens and traces contamination sources. Metagenomic approaches offer a comprehensive view of the genomic composition of microbial communities, facilitating the detection of...

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Literature Corpus work
b28d813e-a323-5eac-b0c7-e5a2fd633142
DOI
10.1101/2024.06.26.600753
Open publication

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PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and trackingDOI 10.1101/2024.06.26.600753
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