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Article

Single Laboratory Evaluation of the Q20+ Nanopore Sequencing Kit for Bacterial Outbreak Investigations.

International journal of molecular sciences - 5 Nov 2024

Hoffmann Maria, Jang Jay Hee, Tallent Sandra M, Gonzalez-Escalona Narjol

Abstract excerpt

Leafy greens are a significant source of produce-related Shiga toxin-producing Escherichia coli (STEC) outbreaks in the United States, with agricultural water often implicated as a potential source. Current FDA outbreak detection protocols are time-consuming and rely on sequencing methods performed in costly equipment. This study evaluated the potential of Oxford Nanopore Technologies (ONT) with Q20+ chemistry as...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 39595947
DOI: 10.3390/ijms252211877
PMCID: PMC11594029

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