Article
Variant-resolved prediction of context-specific isoform variation with a graph-based attention model.
Cell genomics - 8 Apr 2026
Litman Aviya, Pan Zhicheng, Sokolova Ksenia, Fang Joyce, Marvin Tess, Sauerwald Natalie, Park Christopher Y, Theesfeld Chandra L, Troyanskaya Olga G
Abstract excerpt
In eukaryotes, most genes produce multiple transcript isoforms that diversify the transcriptome and proteome, serving as a key mechanism of functional regulation. Genetic variation can disrupt the RNA processing signals that shape isoform structure and abundance, yet modeling these effects at full-length isoform resolution remains challenging due to the complexity of transcript regulation. Here, we introduce...
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