Article
A multiscale functional map of somatic mutations in cancer integrating protein structure and network topology.
Nature communications - 24 Jan 2025
Zhang Yingying, Leung Alden K, Kang Jin Joo, Sun Yu, Wu Guanxi, Li Le, Sun Jiayang, Cheng Lily, Qiu Tian, Zhang Junke, Wierbowski Shayne D, Gupta Shagun, Booth James G, Yu Haiyuan
Abstract excerpt
A major goal of cancer biology is to understand the mechanisms driven by somatically acquired mutations. Two distinct methodologies-one analyzing mutation clustering within protein sequences and 3D structures, the other leveraging protein-protein interaction network topology-offer complementary strengths. We present NetFlow3D, a unified, end-to-end 3D structurally-informed protein interaction network propagation...
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