Article
ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs.
Nucleic acids research - 5 Jul 2022
Boytsov Alexandr, Abramov Sergey, Aiusheeva Ariuna Z, Kasianova Alexandra M, Baulin Eugene, Kuznetsov Ivan A, Aulchenko Yurii S, Kolmykov Semyon, Yevshin Ivan, Kolpakov Fedor, Vorontsov Ilya E, Makeev Vsevolod J, Kulakovskiy Ivan V
Abstract excerpt
We present ANANASTRA, https://ananastra.autosome.org, a web server for the identification and annotation of regulatory single-nucleotide polymorphisms (SNPs) with allele-specific binding events. ANANASTRA accepts a list of dbSNP IDs or a VCF file and reports allele-specific binding (ASB) sites of particular transcription factors or in specific cell types, highlighting those with ASBs significantly enriched at...
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