Detecting selection using extended haplotype homozygosity (EHH)-based statistics in unphased or unpolarized data.

Abstract excerpt

Analysis of population genetic data often includes a search for genomic regions with signs of recent positive selection. One of such approaches involves the concept of extended haplotype homozygosity (EHH) and its associated statistics. These statistics typically require phased haplotypes, and some of them necessitate polarized variants. Here, we unify and extend previously proposed modifications to loosen these...

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