Article
Detecting Allele-Specific Alternative Splicing from Population-Scale RNA-Seq Data.
American journal of human genetics - 3 Sept 2020
Demirdjian Levon, Xu Yungang, Bahrami-Samani Emad, Pan Yang, Stein Shayna, Xie Zhijie, Park Eddie, Wu Ying Nian, Xing Yi
Abstract excerpt
RNA sequencing (RNA-seq) is a powerful technology for studying human transcriptome variation. We introduce PAIRADISE (Paired Replicate Analysis of Allelic Differential Splicing Events), a method for detecting allele-specific alternative splicing (ASAS) from RNA-seq data. Unlike conventional approaches that detect ASAS events one sample at a time, PAIRADISE aggregates ASAS signals across multiple individuals in a...
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