Article
Codon usage influences fitness through RNA toxicity.
Proceedings of the National Academy of Sciences of the United States of America - 21 Aug 2018
Mittal Pragya, Brindle James, Stephen Julie, Plotkin Joshua B, Kudla Grzegorz
Abstract excerpt
Many organisms are subject to selective pressure that gives rise to unequal usage of synonymous codons, known as codon bias. To experimentally dissect the mechanisms of selection on synonymous sites, we expressed several hundred synonymous variants of the GFP gene in Escherichia coli, and used quantitative growth and viability assays to estimate bacterial fitness. Unexpectedly, we found many synonymous variants...
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