Article
Measurements of Intrahost Viral Diversity Are Extremely Sensitive to Systematic Errors in Variant Calling.
Journal of virology - 1 Aug 2016
McCrone John T, Lauring Adam S
Abstract excerpt
UNLABELLED: With next-generation sequencing technologies, it is now feasible to efficiently sequence patient-derived virus populations at a depth of coverage sufficient to detect rare variants. However, each sequencing platform has characteristic error profiles, and sample collection, target amplification, and library preparation are additional processes whereby errors are introduced and propagated. Many studies...
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