Article
BACOM2.0 facilitates absolute normalization and quantification of somatic copy number alterations in heterogeneous tumor.
Scientific reports - 9 Sept 2015
Fu Yi, Yu Guoqiang, Levine Douglas A, Wang Niya, Shih Ie-Ming, Zhang Zhen, Clarke Robert, Wang Yue
Abstract excerpt
Most published copy number datasets on solid tumors were obtained from specimens comprised of mixed cell populations, for which the varying tumor-stroma proportions are unknown or unreported. The inability to correct for signal mixing represents a major limitation on the use of these datasets for subsequent analyses, such as discerning deletion types or detecting driver aberrations. We describe the BACOM2.0...
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