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Article

Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data.

Nucleic acids research - 2 Dec 2015

Andergassen Daniel, Dotter Christoph P, Kulinski Tomasz M, Guenzl Philipp M, Bammer Philipp C, Barlow Denise P, Pauler Florian M, Hudson Quanah J

Abstract excerpt

Detecting allelic biases from high-throughput sequencing data requires an approach that maximises sensitivity while minimizing false positives. Here, we present Allelome.PRO, an automated user-friendly bioinformatics pipeline, which uses high-throughput sequencing data from reciprocal crosses of two genetically distinct mouse strains to detect allele-specific expression and chromatin modifications. Allelome.PRO...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 26202974
DOI: 10.1093/nar/gkv727
PMCID: PMC4666383

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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