Article
Concordance of copy number alterations using a common analytic pipeline for genome-wide analysis of Illumina and Affymetrix genotyping data: a report from the Children's Oncology Group.
Cancer genetics - 1 Jan 2000
Vujkovic Marijana, Attiyeh Edward F, Ries Rhonda E, Horn Michelle, Goodman Elizabeth K, Ding Yang, Kavcic Marko, Alonzo Todd A, Gerbing Robert B, Hirsch Betsy, Raimondi Susana, Gamis Alan S, Meshinchi Soheil, Aplenc Richard
Abstract excerpt
Copy number alterations (CNAs) are a hallmark of pediatric cancer genomes. An increasing number of research groups use multiple platforms and software packages to detect and analyze CNAs. However, different platforms have experimental and analysis-specific biases that may yield different results. We sought to estimate the concordance of CNAs in children with de novo acute myeloid leukemia between two experimental...
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