Article
Algorithm implementation for CNV discovery using Affymetrix and Illumina SNP array data.
Methods in molecular biology (Clifton, N.J.) - 1 Jan 2012
Winchester Laura, Ragoussis Jiannis
Abstract excerpt
SNP array data can be analysed for the purpose of calling SNP alleles but also for determining the absolute copy number of a certain genomic segment. Here, the method for detecting copy number (CN) change using intensity data from SNP arrays is focused on. Methods incorporating data from the two main genotyping platforms, Affymetrix and Illumina, are described and possible options and problems that may be faced...
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