Article
Reconstruction of Genome Ancestry Blocks in Multiparental Populations.
Genetics - 1 Aug 2015
Zheng Chaozhi, Boer Martin P, van Eeuwijk Fred A
Abstract excerpt
We present a general hidden Markov model framework called R: econstructing A: ncestry B: locks BIT: by bit (RABBIT) for reconstructing genome ancestry blocks from single-nucleotide polymorphism (SNP) array data, a required step for quantitative trait locus (QTL) mapping. The framework can be applied to a wide range of mapping populations such as the Arabidopsis multiparent advanced generation intercross (MAGIC),...
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