Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Wavelet-based identification of DNA focal genomic aberrations from single nucleotide polymorphism arrays.

BMC bioinformatics - 11 May 2011

Hur Youngmi, Lee Hyunju

Abstract excerpt

BACKGROUND: Copy number aberrations (CNAs) are an important molecular signature in cancer initiation, development, and progression. However, these aberrations span a wide range of chromosomes, making it hard to distinguish cancer related genes from other genes that are not closely related to cancer but are located in broadly aberrant regions. With the current availability of high-resolution data sets such as...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosome Aberrations
Share to DNA Copy Number Variations
Share to FGF10 gene

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Glioblastoma

Share to Lung Neoplasms

Share to Oligonucleotide Array Sequence Analysis

Share to Polymorphism, Single Nucleotide

Source

Open in PubMed Open full text

Identifiers

PMID: 21569311
DOI: 10.1186/1471-2105-12-146
PMCID: PMC3114745

Genes

FGF10
SMAD7

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Wavelet-based identification of DNA focal genomic aberrations from single nucleotide polymorphism arrays.PMID 21569311Read ↗

Identification of cancer-driver genes in focal genomic alterations from whole genome sequencing data.Semantic proximity Read ↗

TAFFYS: An Integrated Tool for Comprehensive Analysis of Genomic Aberrations in Tumor Samples.Semantic proximity Read ↗

Robust identification of extrachromosomal DNA and genetic variants using multiple genetic abnormality sequencing (MGA-Seq)Semantic proximity Read ↗

Two Distinct Categories of Focal Deletions in Cancer GenomesSemantic proximity Read ↗

Single nucleotide polymorphism microarray analysis of genetic alterations in cancer.Semantic proximity Read ↗

Genome-wide copy number analysis in esophageal adenocarcinoma using high-density single-nucleotide polymorphism arrays.Semantic proximity Read ↗

Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma.Semantic proximity Read ↗

FocalScan: Scanning for altered genes in cancer based on coordinated DNA and RNA change.Semantic proximity Read ↗

A statistical approach for detecting genomic aberrations in heterogeneous tumor samples from single nucleotide polymorphism genotyping data.Semantic proximity Read ↗

WaveCNV: allele-specific copy number alterations in primary tumors and xenograft models from next-generation sequencing.Semantic proximity Read ↗

Targeted genomic screen reveals focal long non-coding RNA copy number alterations in cancerSemantic proximity Read ↗

Comprehensive study of tumour single nucleotide polymorphism array data reveals significant driver aberrations and disrupted signalling pathways in human hepatocellular cancer.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.