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Article

Combining functional and linkage disequilibrium information in the selection of tag SNPs.

Bioinformatics (Oxford, England) - 1 Jan 2007

Sham P C, Ao S I, Kwan J S H, Kao P, Cheung F, Fong P Y, Ng M K

Abstract excerpt

UNLABELLED: We have developed an online program, WCLUSTAG, for tag SNP selection that allows the user to specify variable tagging thresholds for different SNPs. Tag SNPs are selected such that a SNP with user-specified tagging threshold C will have a minimum R2 of C with at least one tag SNP. This flexible feature is useful for researchers who wish to prioritize genomic regions or SNPs in an association study....

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PMID: 17060359
DOI: 10.1093/bioinformatics/btl532

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