Article
A genetic algorithm approach to detecting lineage-specific variation in selection pressure.
Molecular biology and evolution - 1 Mar 2005
Pond Sergei L Kosakovsky, Frost Simon D W
Abstract excerpt
The ratio of nonsynonymous (dN) to synonymous (dS) substitution rates, omega, provides a measure of selection at the protein level. Models have been developed that allow omega to vary among lineages. However, these models require the lineages in which differential selection has acted to be specified a priori. We propose a genetic algorithm approach to assign lineages in a phylogeny to a fixed number of different...
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