Article

Decryption of sequence, structure, and functional features of SINE repeat elements in SINEUP non-coding RNA–mediated post-transcriptional gene regulation

2023-05-22

Abstract excerpt

RNA structure folding largely influences RNA regulation by providing flexibility and functional diversity. In silico and in vitro analyses are limited in their ability to capture the intricate relationships between dynamic RNA structure and RNA functional diversity present in the cell. Here, we investigate sequence, structure and functional features of mouse and human SINE-transcribed retrotransposons embedded in...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: bd1f660a-465c-56ad-b1a6-0008671ebfd6
DOI: 10.1101/2023.05.22.541671

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Decryption of sequence, structure, and functional features of SINE repeat elements in SINEUP non-coding RNA–mediated post-transcriptional gene regulationDOI 10.1101/2023.05.22.541671Read

RNA polymerase III transcription-associated polyadenylation promotes the accumulation of noncoding retrotransposons during infectionSemantic proximity Read

Genome-wide RNA structure changes during human neurogenesis drive gene regulatory networksSemantic proximity Read

Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNASemantic proximity Read

A systematic delineation of 3′UTR regulatory elements and their contextual associationsSemantic proximity Read

Functional exploration of antisense long non-coding RNAs containing transposable elements : a bioinformatics approachSemantic proximity Read

Small regulatory RNAs in mammals.Semantic proximity Read

HERVs as building blocks of RNA regulatory architecture in the human genomeSemantic proximity Read

Structural architecture of the human long non-coding RNA, steroid receptor RNA activator.Semantic proximity Read

The role of SRSF3 splicing factor in generating circular RNAsSemantic proximity Read

RNA Polymerase III Advances: Structural and tRNA Functional Views.Semantic proximity Read

RNA Folding Energy of Long-Range Genomic Interactions Regulates Discontinuous Transcription in SARS-CoV-2.Semantic proximity Read

A small RNA guides a post-transcriptional regulatory protein to its targetSemantic proximity Read