Article

PipeIT2: A tumor-only somatic variant calling workflow for Molecular Diagnostic Ion Torrent sequencing data

2022-06-30

Abstract excerpt

<h4>ABSTRACT</h4> Precision oncology relies on the accurate identification of somatic mutations in cancer patients. While the sequencing of the tumoral tissue is frequently part of routine clinical care, the healthy counterparts are rarely sequenced. We previously published PipeIT, a somatic variant calling workflow specific for Ion Torrent sequencing data enclosed in a Singularity container. PipeIT combines user...

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Literature Corpus work: a53c768a-3b14-515f-87f1-b1340ddb5eb4
DOI: 10.1101/2022.06.28.497937

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