Article

Estimating epidemic dynamics with genomic and time series data

2023-08-08

Abstract excerpt

Accurately estimating the prevalence and transmissibility of an infectious disease is an important task in genetic infectious disease epidemiology. However, generating accurate estimates of these quantities, that are informed by both epidemic time series and pathogen genome sequence data, is a challenging problem. While birth-death processes and coalescent-based models are popular methods for modelling the transmi...

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Literature Corpus work: a20b464e-2f27-53bf-b8a1-c5c19d5b115f
DOI: 10.1101/2023.08.03.23293620

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