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Epidemiological inference from pathogen genomes: A review of phylodynamic models and applications

1 Jan 2022

Abstract excerpt

Phylodynamics requires an interdisciplinary understanding of phylogenetics, epidemiology, and statistical inference. It has also experienced more intense application than ever before amid the SARS-CoV-2 pandemic. In light of this, we present a review of phylodynamic models beginning with foundational models and assumptions. Our target audience is public health researchers, epidemiologists, and biologists seeking...

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PMID: 35775026
DOI: 10.1093/ve/veac045

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