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Metagenomic Next-Generation Sequencing of Rectal Swabs for the Surveillance of Antimicrobial Resistant Organisms on the Illumina Miseq and Oxford MinION Platforms

2020-04-18

Abstract excerpt

<h4>Purpose</h4> Antimicrobial resistance (AMR) is a public health threat where efficient surveillance is needed to prevent outbreaks. Existing methods for detection of gastrointestinal colonization of multidrug-resistant organisms (MDRO) are limited to specific organisms or resistance mechanisms. Metagenomic next-generation sequencing (mNGS) is a more rapid and agnostic diagnostic approach for microbiome and res...

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Literature Corpus work
e9166a41-3c5f-59e2-a0ba-90fe1be33089
DOI
10.1101/2020.04.16.044214
Open publication

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