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Article

Contributions of Long-Read Sequencing for the Detection of Antimicrobial Resistance.

Pathogens (Basel, Switzerland) - 28 Aug 2024

Sierra Roberto, Roch Mélanie, Moraz Milo, Prados Julien, Vuilleumier Nicolas, Emonet Stéphane, Andrey Diego O

Abstract excerpt

BACKGROUND: In the context of increasing antimicrobial resistance (AMR), whole-genome sequencing (WGS) of bacteria is considered a highly accurate and comprehensive surveillance method for detecting and tracking the spread of resistant pathogens. Two primary sequencing technologies exist: short-read sequencing (50-300 base pairs) and long-read sequencing (thousands of base pairs). The former, based on Illumina...

Read the complete abstract on PubMed

Topics

Whole Genome Sequencing
Klebsiella pneumoniae
Humans
Drug Resistance, Bacterial
High-Throughput Nucleotide Sequencing
Genome, Bacterial

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

beta-Lactamases

Anti-Bacterial Agents

Polymorphism, Single Nucleotide

Microbial Sensitivity Tests

Klebsiella Infections

Source

Open in PubMed Open full text

Identifiers

PMID: 39338921
DOI: 10.3390/pathogens13090730
PMCID: PMC11434816

Provenance

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