Back to search

Article

A Guide to the Quantitative Proteomic Profiles of the Cancer Cell Line Encyclopedia

2020-02-03

Abstract excerpt

We recently reported the quantitative proteomics of 375 samples as part of the Cancer Cell Line Encyclopedia (Nusinow et al., 2020). Mass spectrometry-based proteomics data is broadly unfamiliar to most biologists in our experience, resulting in questions from analysts about how to use the data. From the proteomics community there was interest about how we normalized the data, as the scope of this project was so m...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
97928571-73b0-5ebf-8ff0-08b89e711134
DOI
10.1101/2020.02.03.932384
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
A Guide to the Quantitative Proteomic Profiles of the Cancer Cell Line EncyclopediaDOI 10.1101/2020.02.03.932384
Quantitative Proteomics of the Cancer Cell Line Encyclopedia.Semantic proximity
Pan-cancer proteomic map of 949 human cell lines reveals principles of cancer vulnerabilitiesSemantic proximity
Data Descriptor: Proteomic profiling across breast cancer cell lines and modelsSemantic proximity
An integrated landscape of protein expression in human cancerSemantic proximity
Application of Cancer Cell Line Encyclopedia for Measuring Correlation Between Transcriptomics and Proteomics as a Guide for System-level InsightsSemantic proximity
Optimization of cell lines as tumour models by integrating multi-omics data.Semantic proximity
A pan-cancer proteomic perspective on The Cancer Genome AtlasSemantic proximity
Rapid proteotyping reveals cancer biology and drug response determinants in the NCI-60 cellsSemantic proximity
Comprehensive transcriptomic analysis of cell lines as models of primary tumors across 22 tumor typesSemantic proximity
A unified pan-cancer proteome atlasSemantic proximity
Finding the best cell lines across pan-cancer to use in pre-clinical research as a proxy for patient tumor samples considering immune cells, multi-omics, and cancer pathwaysSemantic proximity
Integrative proteomic profiling of ovarian cancer cell lines reveals precursor cell associated proteins and functional statusSemantic proximity
Select a neighboring publication to make it the new centre.