Article

Systematic benchmarking of ‘all-in-one’ microbial SNP calling pipelines

2022-05-06

Abstract excerpt

Clinical and public health microbiology is increasingly utilising whole genome sequencing (WGS) technology and this has lead to the development of a myriad of analysis tools and bioinformatics pipelines. Single nucleotide polymorphism (SNP) analysis is an approach used for strain characterisation and determining isolate relatedness. However, in order to ensure the development of robust methodologies suitable for c...

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Literature Corpus work: 82e361e8-0691-536f-aaea-e377d5ccabb2
DOI: 10.1101/2022.05.05.487569

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