Article

Exploring differences across pangenome-graph representations using <i>Escherichia coli</i> O157:H7 as a model

2026-02-26

Abstract excerpt

Pangenome graphs are increasingly used to represent population-scale bacterial diversity, yet construction methods span fundamentally different representation paradigms whose outputs and sensitivities to assembly quality remain poorly quantified. We systematically reviewed microbial pangenome graph tools and benchmarked six representative methods spanning gene-cluster, compacted coloured de Bruijn graph (ccDBG), m...

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Literature Corpus work: 5519df9a-0d77-564b-a34e-95966cbfd336
DOI: 10.64898/2026.02.25.707890

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