Article

The Progenetix oncogenomic resource in 2021

2021-02-15

Abstract excerpt

In cancer, copy number aberrations (CNA) represent a type of nearly ubiquitous and frequently extensive structural genome variations. To disentangle the molecular mechanisms underlying tumorigenesis as well as identify and characterize molecular subtypes, the comparative and meta-analysis of large genomic variant collections can be of immense importance. Over the last decades, cancer genomic profiling projects hav...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 3e6a3c8e-d6f4-51f1-8b63-dfe7cbfc404f
DOI: 10.1101/2021.02.15.428237

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

The Progenetix oncogenomic resource in 2021DOI 10.1101/2021.02.15.428237Read

CNA Explorer and anaLyzer (CNAEL): an interactive web application and standard operating procedure enabling efficient clinical review and reporting of complex NGS-derived tumor copy number profilesSemantic proximity Read

Analytic validation and clinical utilization of the comprehensive genomic profiling test, GEM ExTra®Semantic proximity Read

Nationwide Genomic Data Analysis of Central Nervous System Tumors in Japan based on C-CAT DatabaseSemantic proximity Read

Development and Clinical Validation of OncCNV: A Pipeline for Comprehensive Genome-Wide Analysis of Oncogene Amplifications, Homozygous Deletions, and Biallelic Inactivation of Tumor Suppressor Genes Using the TruSight Oncology 500 Kit.Semantic proximity Read

Nationwide genomic data analysis of central nervous system tumors in Japan based on C-CAT database.Semantic proximity Read

PULPO: pipeline of understanding large-scale patterns of oncogenomic signatures.Semantic proximity Read

PULPO: Pipeline of understanding large-scale patterns of oncogenomic signaturesSemantic proximity Read

Comprehensive patient-level classification and quantification of driver events in TCGA PanCanAtlas cohortsSemantic proximity Read

CNApp: quantification of genomic copy number alterations in cancer and integrative analysis to unravel clinical implicationsSemantic proximity Read

Copy number variant heterogeneity among cancer types reflects inconsistent concordance with diagnostic classificationsSemantic proximity Read

Inferring copy number and genotype in tumour exome data.Semantic proximity Read

CNAReporter: a GenePattern pipeline for the generation of clinical reports of genomic alterations.Semantic proximity Read