Article

A Unified Framework to Analyze Transposable Element Insertion Polymorphisms using Graph Genomes

2023-09-15

Abstract excerpt

Transposable Elements are ubiquitous mobile DNA sequences evolving among their hosts’ genomes, generating insertion polymorphisms that contribute to genomic diversity. We present GraffiTE, a flexible pipeline to analyze polymorphic mobile elements. By integrating state-of-the-art structural variant detection algorithms and graph genomes, GraffiTE identifies polymorphic mobile elements from genomic assemblies and/o...

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Literature Corpus work: 3a8f9f21-00b8-5327-8bef-12c99d290d04
DOI: 10.1101/2023.09.11.557209

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