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Article

Adaptive immune receptor genotyping using the corecount program.

Frontiers in immunology - 1 Jan 2023

Narang Sanjana, Kaduk Mateusz, Chernyshev Mark, Karlsson Hedestam Gunilla B, Corcoran Martin M

Abstract excerpt

We present a new Rep-Seq analysis tool called corecount, for analyzing genotypic variation in immunoglobulin (IG) and T cell receptor (TCR) genes. corecount is highly efficient at identifying V alleles, including those that are infrequently used in expressed repertoires and those that contain 3' end variation that are otherwise refractory to reliable identification during germline inference from expressed...

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Identifiers

PMID: 37114042
DOI: 10.3389/fimmu.2023.1125884
PMCID: PMC10126697

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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