Article
Predicting prime editing efficiency and product purity by deep learning.
Nature biotechnology - 1 Aug 2023
Mathis Nicolas, Allam Ahmed, Kissling Lucas, Marquart Kim Fabiano, Schmidheini Lukas, Solari Cristina, Balázs Zsolt, Krauthammer Michael, Schwank Gerald
Abstract excerpt
Prime editing is a versatile genome editing tool but requires experimental optimization of the prime editing guide RNA (pegRNA) to achieve high editing efficiency. Here we conducted a high-throughput screen to analyze prime editing outcomes of 92,423 pegRNAs on a highly diverse set of 13,349 human pathogenic mutations that include base substitutions, insertions and deletions. Based on this dataset, we identified...
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