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MethylToSNP: identifying SNPs in Illumina DNA methylation array data.

Epigenetics & chromatin - 20 Dec 2019

LaBarre Brenna A, Goncearenco Alexander, Petrykowska Hanna M, Jaratlerdsiri Weerachai, Bornman M S Riana, Hayes Vanessa M, Elnitski Laura

Abstract excerpt

BACKGROUND: Current array-based methods for the measurement of DNA methylation rely on the process of sodium bisulfite conversion to differentiate between methylated and unmethylated cytosine bases in DNA. In the absence of genotype data this process can lead to ambiguity in data interpretation when a sample has polymorphisms at a methylation probe site. A common way to minimize this problem is to exclude such...

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Identifiers

PMID: 31861999
DOI: 10.1186/s13072-019-0321-6
PMCID: PMC6923858

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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