Article
Diff-seq: A high throughput sequencing-based mismatch detection assay for DNA variant enrichment and discovery.
Nucleic acids research - 20 Apr 2018
Aggeli Dimitra, Karas Vlad O, Sinnott-Armstrong Nicholas A, Varghese Vici, Shafer Robert W, Greenleaf William J, Sherlock Gavin
Abstract excerpt
Much of the within species genetic variation is in the form of single nucleotide polymorphisms (SNPs), typically detected by whole genome sequencing (WGS) or microarray-based technologies. However, WGS produces mostly uninformative reads that perfectly match the reference, while microarrays require genome-specific reagents. We have developed Diff-seq, a sequencing-based mismatch detection assay for SNP discovery...
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