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Article

Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements.

Nucleic acids research - 16 Mar 2018

Watters Kyle E, Choudhary Krishna, Aviran Sharon, Lucks Julius B, Perry Keith L, Thompson Jeremy R

Abstract excerpt

In single stranded (+)-sense RNA viruses, RNA structural elements (SEs) play essential roles in the infection process from replication to encapsidation. Using selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq) and covariation analysis, we explore the structural features of the third genome segment of cucumber mosaic virus (CMV), RNA3 (2216 nt), both in vitro and in plant cell...

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Identifiers

PMID: 29294088
DOI: 10.1093/nar/gkx1273
PMCID: PMC5861449

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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