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Article

A high-throughput approach to profile RNA structure.

Nucleic acids research - 17 Mar 2017

Delli Ponti Riccardo, Marti Stefanie, Armaos Alexandros, Tartaglia Gian Gaetano

Abstract excerpt

Here we introduce the Computational Recognition of Secondary Structure (CROSS) method to calculate the structural profile of an RNA sequence (single- or double-stranded state) at single-nucleotide resolution and without sequence length restrictions. We trained CROSS using data from high-throughput experiments such as Selective 2΄-Hydroxyl Acylation analyzed by Primer Extension (SHAPE; Mouse and HIV...

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Identifiers

PMID: 27899588
DOI: 10.1093/nar/gkw1094
PMCID: PMC5389523

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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