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Article

Detection and validation of structural variations in bovine whole-genome sequence data.

Genetics, selection, evolution : GSE - 25 Jan 2017

Chen Long, Chamberlain Amanda J, Reich Coralie M, Daetwyler Hans D, Hayes Ben J

Abstract excerpt

BACKGROUND: Several examples of structural variation (SV) affecting phenotypic traits have been reported in cattle. Currently the identification of SV from whole-genome sequence data (WGS) suffers from a high false positive rate. Our aim was to construct a high quality set of SV calls in cattle using WGS data. First, we tested two SV detection programs, Breakdancer and Pindel, and the overlap of these methods, on...

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Identifiers

PMID: 28122487
DOI: 10.1186/s12711-017-0286-5
PMCID: PMC5267451

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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