Article
GeneiASE: Detection of condition-dependent and static allele-specific expression from RNA-seq data without haplotype information.
Scientific reports - 18 Feb 2016
Edsgärd Daniel, Iglesias Maria Jesus, Reilly Sarah-Jayne, Hamsten Anders, Tornvall Per, Odeberg Jacob, Emanuelsson Olof
Abstract excerpt
Allele-specific expression (ASE) is the imbalance in transcription between maternal and paternal alleles at a locus and can be probed in single individuals using massively parallel DNA sequencing technology. Assessing ASE within a single sample provides a static picture of the ASE, but the magnitude of ASE for a given transcript may vary between different biological conditions in an individual. Such...
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