Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

HLA Haplotype Validator for quality assessments of HLA typing.

Human immunology - 1 Mar 2016

Osoegawa Kazutoyo, Mack Steven J, Udell Julia, Noonan David A, Ozanne Steven, Trachtenberg Elizabeth, Prestegaard Matthew

Abstract excerpt

HLA alleles are observed in specific haplotypes, due to Linkage Disequilibrium (LD) between particular alleles. Haplotype frequencies for alleles in strong LD have been established for specific ethnic groups and racial categories. Application of high-resolution HLA typing using Next Generation Sequencing (NGS) is becoming a common practice in research and clinical laboratory settings. HLA typing errors using NGS...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Computational Biology
Share to Databases, Genetic

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Histocompatibility Testing

Share to HLA Antigens

Share to Linkage Disequilibrium

Share to Reproducibility of Results

Share to Software

Share to Web Browser

Source

Open in PubMed Open full text

Identifiers

PMID: 26546873
DOI: 10.1016/j.humimm.2015.10.018
PMCID: PMC4828295

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

HLA Haplotype Validator for quality assessments of HLA typing.PMID 26546873Read ↗

NovAT tool-Reliable novel HLA alleles identification from next-generation sequencing data.Semantic proximity Read ↗

Development of a high-resolution NGS-based HLA-typing and analysis pipeline.Semantic proximity Read ↗

HLA-A, -B, -C, -DRB1 allele and haplotype frequencies of the Korean population and performance characteristics of HLA typing by next-generation sequencing.Semantic proximity Read ↗

Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data.Semantic proximity Read ↗

Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping.Semantic proximity Read ↗

HLAscan: genotyping of the HLA region using next-generation sequencing data.Semantic proximity Read ↗

High-Definition Genomic Analysis of HLA Genes Via Comprehensive HLA Allele Genotyping.Semantic proximity Read ↗

HLA-HD: An accurate HLA typing algorithm for next-generation sequencing data.Semantic proximity Read ↗

Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data.Semantic proximity Read ↗

Histoimmunogenetics Markup Language 1.0: Reporting Next Generation Sequencing-based HLA and KIR GenotypingSemantic proximity Read ↗

Advancements in HLA Typing Techniques and Their Impact on Transplantation MedicineSemantic proximity Read ↗

Benchmarking freely available human leukocyte antigen typing algorithms across varying genes, coverages and typing resolutionsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.