Article
Analysis of the history and spread of HIV-1 in Uganda using phylodynamics.
The Journal of general virology - 1 Jul 2015
Yebra Gonzalo, Ragonnet-Cronin Manon, Ssemwanga Deogratius, Parry Chris M, Logue Christopher H, Cane Patricia A, Kaleebu Pontiano, Brown Andrew J Leigh
Abstract excerpt
HIV prevalence has decreased in Uganda since the 1990s, but remains substantial within high-risk groups. Here, we reconstruct the history and spread of HIV subtypes A1 and D in Uganda and explore the transmission dynamics in high-risk populations. We analysed HIV pol sequences from female sex workers in Kampala (n = 42), Lake Victoria fisher-folk (n = 46) and a rural clinical cohort (n = 74), together with...
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