Article
Identification of HPV integration and gene mutation in HeLa cell line by integrated analysis of RNA-Seq and MS/MS data.
Journal of proteome research - 3 Apr 2015
Sun Han, Chen Chen, Lian Baofeng, Zhang Menghuan, Wang Xiaojing, Zhang Bing, Li Yixue, Yang Pengyuan, Xie Lu
Abstract excerpt
HeLa cell line, which was derived from cervical carcinoma, provides an idea platform to study both the integration of human papillomavirus and the massive mutations occurring on the cancer cell genome. Proteogenomics is a field with the intersection of proteomics and genomics to perform gene annotation and identify gene mutation. In this work, we first identified the SNV/INDEL, structural variation (SV), and...
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