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Article

OncoCis: annotation of cis-regulatory mutations in cancer.

Genome biology - 1 Jan 2014

Perera Dilmi, Chacon Diego, Thoms Julie A I, Poulos Rebecca C, Shlien Adam, Beck Dominik, Campbell Peter J, Pimanda John E, Wong Jason W H

Abstract excerpt

Whole genome sequencing has enabled the identification of thousands of somatic mutations within non-coding genomic regions of individual cancer samples. However, identification of mutations that potentially alter gene regulation remains a major challenge. Here we present OncoCis, a new method that enables identification of potential cis-regulatory mutations using cell type-specific genome and epigenome-wide...

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Identifiers

PMID: 25298093
DOI: 10.1186/s13059-014-0485-0
PMCID: PMC4224696

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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