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Article

BEETL-fastq: a searchable compressed archive for DNA reads.

Bioinformatics (Oxford, England) - 1 Oct 2014

Janin Lilian, Schulz-Trieglaff Ole, Cox Anthony J

Abstract excerpt

MOTIVATION: FASTQ is a standard file format for DNA sequencing data, which stores both nucleotides and quality scores. A typical sequencing study can easily generate hundreds of gigabytes of FASTQ files, while public archives such as ENA and NCBI and large international collaborations such as the Cancer Genome Atlas can accumulate many terabytes of data in this format. Compression tools such as gzip are often...

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PMID: 24950811
DOI: 10.1093/bioinformatics/btu387

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

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