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Article

Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat.

BMC bioinformatics - 1 Jan 2013

Ranwez Vincent, Holtz Yan, Sarah Gautier, Ardisson Morgane, Santoni Sylvain, Glémin Sylvain, Tavaud-Pirra Muriel, David Jacques

Abstract excerpt

BACKGROUND: Using Next Generation Sequencing, SNP discovery is relatively easy on diploid species and still hampered in polyploid species by the confusion due to homeology. We develop HomeoSplitter; a fast and effective solution to split original contigs obtained by RNAseq into two homeologous se...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 24564644
DOI: 10.1186/1471-2105-14-S15-S15
PMCID: PMC3851826

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 4 Sept 2026. Prepared record publication-24564644-2026-09-04.2. Manifest publication-graph-cohort-2026-09-04.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 4 Sept 2026.

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