Article
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes.
BMC genomics - 14 Dec 2010
Akhunov Eduard D, Akhunova Alina R, Anderson Olin D, Anderson James A, Blake Nancy, Clegg Michael T, Coleman-Derr Devin, Conley Emily J, Crossman Curt C, Deal Karin R, Dubcovsky Jorge, Gill Bikram S, Gu Yong Q, Hadam Jakub, Heo Hwayoung, Huo Naxin, Lazo Gerard R, Luo Ming-Cheng, Ma Yaqin Q, Matthews David E, McGuire Patrick E, Morrell Peter L, Qualset Calvin O, Renfro James, Tabanao Dindo, Talbert Luther E, Tian Chao, Toleno Donna M, Warburton Marilyn L, You Frank M, Zhang Wenjun, Dvorak Jan
Abstract excerpt
BACKGROUND: A genome-wide assessment of nucleotide diversity in a polyploid species must minimize the inclusion of homoeologous sequences into diversity estimates and reliably allocate individual haplotypes into their respective genomes. The same requirements complicate the development and deployment of single nucleotide polymorphism (SNP) markers in polyploid species. We report here a strategy that satisfies...
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