<i>customProDB</i>: an R package to generate customized protein databases from RNA-Seq data for proteomics search

Abstract excerpt

UNLABELLED: Database search is the most widely used approach for peptide and protein identification in mass spectrometry-based proteomics studies. Our previous study showed that sample-specific protein databases derived from RNA-Seq data can better approximate the real protein pools in the samples and thus improve protein identification. More importantly, single nucleotide variations, short insertion and...

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