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Article

Transforming microbial genotyping: a robotic pipeline for genotyping bacterial strains.

PloS one - 1 Jan 2012

O'Farrell Brian, Haase Jana K, Velayudhan Vimalkumar, Murphy Ronan A, Achtman Mark

Abstract excerpt

Microbial genotyping increasingly deals with large numbers of samples, and data are commonly evaluated by unstructured approaches, such as spread-sheets. The efficiency, reliability and throughput of genotyping would benefit from the automation of manual manipulations within the context of sophisticated data storage. We developed a medium- throughput genotyping pipeline for MultiLocus Sequence Typing (MLST) of...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 23144721
DOI: 10.1371/journal.pone.0048022
PMCID: PMC3483277

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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