Article

RSYD-BASIC: a bioinformatics pipeline for Routine Sequence analYsis and Data processing of BActerial iSolates for clInical miCrobiology

2025-01-10

Abstract excerpt

<h4>Background: </h4> Whole genome sequencing of bacterial isolates is increasingly becoming routine in clinical microbiology; however, subsequent analysis often needs to be started by a bioinformatician even for comprehensive pipelines. To increase the robustness of our workflow and free up bioinformatician work hours for development and advanced analysis, we aimed to produce a robust, customizable bioinformatic...

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Literature Corpus work: f1e41bbe-671d-5a36-abc4-c02c968631cd
DOI: 10.1099/acmi.0.000646.v5

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