Article
SNP calling by sequencing pooled samples.
BMC bioinformatics - 20 Sept 2012
Raineri Emanuele, Ferretti Luca, Esteve-Codina Anna, Nevado Bruno, Heath Simon, Pérez-Enciso Miguel
Abstract excerpt
BACKGROUND: Performing high throughput sequencing on samples pooled from different individuals is a strategy to characterize genetic variability at a small fraction of the cost required for individual sequencing. In certain circumstances some variability estimators have even lower variance than those obtained with individual sequencing. SNP calling and estimating the frequency of the minor allele from pooled...
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