Article
SparSNP: fast and memory-efficient analysis of all SNPs for phenotype prediction.
BMC bioinformatics - 10 May 2012
Abraham Gad, Kowalczyk Adam, Zobel Justin, Inouye Michael
Abstract excerpt
BACKGROUND: A central goal of genomics is to predict phenotypic variation from genetic variation. Fitting predictive models to genome-wide and whole genome single nucleotide polymorphism (SNP) profiles allows us to estimate the predictive power of the SNPs and potentially develop diagnostic models for disease. However, many current datasets cannot be analysed with standard tools due to their large size. RESULTS:...
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