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Article

GemSIM: general, error-model based simulator of next-generation sequencing data.

BMC genomics - 15 Feb 2012

McElroy Kerensa E, Luciani Fabio, Thomas Torsten

Abstract excerpt

BACKGROUND: GemSIM, or General Error-Model based SIMulator, is a next-generation sequencing simulator capable of generating single or paired-end reads for any sequencing technology compatible with the generic formats SAM and FASTQ (including Illumina and Roche/454). GemSIM creates and uses empirically derived, sequence-context based error models to realistically emulate individual sequencing runs and/or...

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Identifiers

PMID: 22336055
DOI: 10.1186/1471-2164-13-74
PMCID: PMC3305602

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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